Bioconductor Technical replicates

Showing : technical replicates • reset

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1.4k

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DRIMSeq R DTU technical replicates deseq2

updated 4.4 years ago by Kevin Blighe ★ 4.0k • written 4.4 years ago by poecile.pal • 0

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6.3k

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limma duplicateCorrelation rna-seq technical replicates biological replicates

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by paul.alto ▴ 50

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limma technical replicates biological replicates paired analysis

updated 5.7 years ago by Aaron Lun ★ 28k • written 5.7 years ago by paul.alto ▴ 50

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2.8k

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ballgown biologicalreplicates technical replicates stringtie

updated 7.1 years ago by Alyssa Frazee ▴ 210 • written 7.8 years ago by linda.boshans • 0

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6.4k

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rnaseq edger technical replicates

updated 7.5 years ago by Ryan C. Thompson ★ 7.9k • written 7.5 years ago by alakatos ▴ 130

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4.9k

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limma microarray duplicatecorrelation technical replicates linear model

updated 8.9 years ago by Aaron Lun ★ 28k • written 8.9 years ago by Eleni Christodoulou ▴ 150

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illumina human ht-12 v4 technical replicates

updated 9.0 years ago by Gordon Smyth 52k • written 9.0 years ago by Eleni Christodoulou ▴ 150

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3.9k

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limma technical replicates

9.1 years ago • updated 9.0 years ago Eleni Christodoulou ▴ 150

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1.5k

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rnaseq ruvnormalize normalization technical replicates

9.1 years ago thomas.wolfe • 0

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3.5k

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limma covariate block paired samples technical replicates

updated 9.1 years ago by Aaron Lun ★ 28k • written 9.1 years ago by eleonoregravier ▴ 70

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1.9k

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technical replicates

9.5 years ago sara.pegolo • 0

11 results • Page 1 of 1

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Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by freemanmclaughlin9969289 • 0

Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…

Comment: How to get around the warning message: mzR has been built against a different Rc by Nan • 0

Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…

Answer: EuroBioC2023 abstract submission closing soon! by excess.gecko.shso • 0

Don't miss out! EuroBioC2023 abstract submissions are nearing the deadline. Sharpen your scientific [Wordle Game][1] skills and submit your…

Answer: EuroBioC2024 abstract submission is open! by excess.gecko.shso • 0

EuroBioC2024 abstract submissions are now open! Join the Oxford conference from Sep 4-6. Submit your abstract by April 26 for short talks, …

Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40

Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …

Votes

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

Awards • All

Teacher to dsull ▴ 40